BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011H12SP1|AL426293
(765 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1754 1422 0.0
>3x_Contig1754
Length = 26052
Score = 1422 bits (711), Expect = 0.0
Identities = 728/739 (98%), Gaps = 1/739 (0%)
Strand = Plus / Minus
Query: 28 aaactttaaagcra-gaacttcataacggaatatgatccttctggmaagtacctagttgt 86
|||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2468 aaactttaaagcgaagaacttcataacggaatatgatccttctggaaagtacctagttgt 2409
Query: 87 agcgacgaagacgaatgavatctacatttacaatgcagaatctggttacgaatcttgtat 146
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 2408 agcgacgaagacgaatgaaatctacatttacaatgcagaatctggttacgaatcttgtat 2349
Query: 147 ctctttttcccctgatgagaaatcggatgatgccatacattccctttgctggtctaatga 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2348 ctctttttcccctgatgagaaatcggatgatgccatacattccctttgctggtctaatga 2289
Query: 207 ttccaaacaaattatcgttgcatataaatcaggattcataaaactattttcactccaaga 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2288 ttccaaacaaattatcgttgcatataaatcaggattcataaaactattttcactccaaga 2229
Query: 267 tgatggattaaagtttctctgtgaaaggcggaatgatatgaaaaccatcacgtcactaat 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2228 tgatggattaaagtttctctgtgaaaggcggaatgatatgaaaaccatcacgtcactaat 2169
Query: 327 aatggatccattaggcagagcattgttagtcggaactcataacgaatgttctatctattc 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2168 aatggatccattaggcagagcattgttagtcggaactcataacgaatgttctatctattc 2109
Query: 387 gttacctgatcttgtgcccttgaraaaatcaatcaagacagataatagaataactggrat 446
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||
Sbjct: 2108 gttacctgatcttgtgcccttgaaaaaatcaatcaagacagataatagaataactggaat 2049
Query: 447 tgacatttcttttgatgggtcaataatatctattttgagcaaagcattagactctcacga 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2048 tgacatttcttttgatgggtcaataatatctattttgagcaaagcattagactctcacga 1989
Query: 507 ttcatttttmagtctctattggtacaatgatttgtctatcctatacaacacggtggttaa 566
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1988 ttcatttttaagtctctattggtacaatgatttgtctatcctatacaacacggtggttaa 1929
Query: 567 vmattcatcacgttccacaatcaagtggtcaaagtcgtgcttaatattttacaccactgg 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1928 aaattcatcacgttccacaatcaagtggtcaaagtcgtgcttaatattttacaccactgg 1869
Query: 627 tgctcttgataaaatgacaatggttgatttacgttcaggcagaccgaaaactatggtatc 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1868 tgctcttgataaaatgacaatggttgatttacgttcaggcagaccgaaaactatggtatc 1809
Query: 687 gaccgatgatcgtmaacgamatgattttgttaagaaaagcaccgatcggagcagtagaac 746
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1808 gaccgatgatcgtaaacgaaatgattttgttaagaaaagcaccgatcggagcagtagaac 1749
Query: 747 tcaaagagacacaccacag 765
|||||||||||||||||||
Sbjct: 1748 tcaaagagacacaccacag 1730
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5114
Number of Sequences: 1807
Number of extensions: 5114
Number of successful extensions: 84
Number of sequences better than 1.0e-20: 1
length of query: 765
length of database: 10,358,551
effective HSP length: 16
effective length of query: 749
effective length of database: 10,329,639
effective search space: 7736899611
effective search space used: 7736899611
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)